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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015888250.1_cds_XP_016442815.1_38039
CDS Infomation

[gene=LOC107768227] [db_xref=GeneID:107768227] [protein=3-dehydroquinate synthase homolog] [protein_id=XP_016442815.1] [location=complement(join(100587..100714,101001..101076,101640..101807,102136..102225,102336..102476,102546..102614,102738..102836,103066..103232,104599..104820,104923..104971))] [gbkey=CDS]
Sequence

ATGGCTATAGTCTTACCTTCACTTTCTGTTTCTTACCCTAAAGTTCCAGGTAAATGGAAA
AATTGTAGATACGCTGATTTCTCCAGTAAAAAGGGAACAATATCTCGTGTTAATAGAGTG
GCTAAAATGTGTGCAATTACAACATCAAAGTCGAAGAAAATAGTTTGGATATGGACAGAG
AACAAGCAAGTGATGACTGCTGCTGTGGAGAGAGGTTGGAATACTTTCATCTTCCCTTCC
AATCGTCAAGATCTTGCCCTTGACTGGTCTTCAATTGCAATGATATCTCCTCTCTTTGTT
GAAGAGGGGGGTCTCTTTGATCACGAGCATCAGAGAGTTGCTGCATTTGCTGAGGTTTCT
TCTCCTCAGCAGTTAGAACAGCTACACATATTGGAGGAACAGGCAGATAATGTTGTTGTT
GATCTATTAGATTGGCAGGTGATACCTGCAGAAAATATTGTTGCGGCTTTTCAAGGCACT
CAGAAAACTGTACTTGCTGTCTCAAAGACACAGTCAGAAGCTCAAGTCTTTCTTGAGGCC
TTGGAACACGGTTTGGGTGGTGTAGTAATGAAAGTTGAGGATGTCGGGGCAATCCTTGAC
CTGAAGGGTTATTTTGACAGAAGACATGAAGTAGACAGTCTGTTGAACTTGACCAAAGCC
AAAATAACTCGTGTTCAAGCGACTGGAATGGGTGACCGTGTCTGTGTGGATATTTGTAGC
CTCATGAGACCTGGTGAAGGACTTCTGGTTGGATCCTTTGCAAGAGGCCTTTTCCTTGTT
CACTCTGAATGCTTGGAGTCAAATTACATTTCTAGCCGGCCTTTTCGAGTTAATGCGGGG
CCTGTTCATGCATATGTTGCTGTTCCAGGAGGAAAGACTAGCTATCTCTCGGAGCTCAAG
TCTGGCAAAGAGGTCATTGTGGTTGATCAAAGGGGGATGCAGCGAACAGCTATTGTTGGA
CGTGTAAAGATTGAGACTAGACCACTTATCCTTGTGGAAGCAAAGGTAGAATCCGAAAAT
GAAAGTTACTCTATACTCTTGCAGAATGCGGAAACAGTTGGATTAGTCTCTCCGCTTCAA
GAGGAGGGATATCAACGAACAACAATTCCTGTGACCTCACTCAAAGTTGGCGATGAGGTT
TGCCTCCTAGTACAGGGAGGTGCTCGGCATACTGGAATACAAATTAAAGAATTTATTGTT
GAGAAGTGA

Peptide Sequence

PEP ID

XP_016442815.1
PEP Infomation

PREDICTED: 3-dehydroquinate synthase homolog [Nicotiana tabacum]
Sequence

MAIVLPSLSVSYPKVPGKWKNCRYADFSSKKGTISRVNRVAKMCAITTSKSKKIVWIWTE
NKQVMTAAVERGWNTFIFPSNRQDLALDWSSIAMISPLFVEEGGLFDHEHQRVAAFAEVS
SPQQLEQLHILEEQADNVVVDLLDWQVIPAENIVAAFQGTQKTVLAVSKTQSEAQVFLEA
LEHGLGGVVMKVEDVGAILDLKGYFDRRHEVDSLLNLTKAKITRVQATGMGDRVCVDICS
LMRPGEGLLVGSFARGLFLVHSECLESNYISSRPFRVNAGPVHAYVAVPGGKTSYLSELK
SGKEVIVVDQRGMQRTAIVGRVKIETRPLILVEAKVESENESYSILLQNAETVGLVSPLQ
EEGYQRTTIPVTSLKVGDEVCLLVQGGARHTGIQIKEFIVEK

Transcript Sequence

Gene sequence data has not been registered.